CNRS researcher, member of SEQUOIA bioinformatics research group, LIFL and INRIA - Lille Nord Europe

Mail address :
LIFL - Batiment INRIA
40 avenue Halley
Haute-Borne
59650 Villeneuve d'Ascq Cedex
France
Phone : 33 (0)3 59 57 79 16, Fax : 33 (0)3 28 77 85 37, Email : Helene.Touzet[AT]lifl.fr

Research Interests

Exon identifier by comparative analysis

• protea, together with Arnaud Fontaine

Computational methods for RNA structure prediction and comparison

• caRNAc, together with Olivier Perriquet
• How to detect non-coding RNAs , together with Arnaud Fontaine
• gardenia
• ACI impBio AReNa, ANR Brasero

Regulatory sequence analysis

• TFM-Explorer, together with Matthieu Defrance
• TFM-Scan, together with Aude Liefooghe and Jean-Sténe Varré
• TFM-Pvalue, together with Jean-Sténe Varré

Publications

List of publications. Also see DBLP.

Current PhD Students

• Arnaud Fontaine: algorithms for RNA structure analysis
• Aude Liefooghe: fast localisation of transcription factor binding sites
• Azadeh Saffarian: indexing for RNA

Teaching

All documents are in French.

Current lectures

• Computational Biology - master recherche informatique
• Introduction to regulatory sequence analysis - master recherche Biologie et Santé
• Bioinformatics - licence and master informatique

Some former lectures

• Programmation en ADA - licence MIAGE
• Algorithmique - licence MIAGE
• Analyse de séquences - DESS Bioinformatique
• Génétique et Bioinformatique - DEUG SV2
• Bioinformatique - maîtrise d'informatique

Graduate programs in bioinformatics: master pro Bioinformatique (DESS), master recherche (DEA)